Papers

1. Bernauer J., Huang X., Sim A.Y.L., Levitt M., Fully differentiable coarse-grained and all-atom knowledge-based potentials for RNA structure evaluation, RNA, 17, 1066 (2011)
2. Sim A.Y.L., Levitt M. Clustering to identify RNA conformations constrained by secondary structure, PNAS, 108, 3590 (2011)
3. Lipfert J.*, Sim A.Y.L.*, Herschlag D., Doniach S., Dissecting electrostatics screening, specific ion binding, and ligand binding in an energetic model for glycine riboswitch folding, RNA, 16, 708 (2010)
4. Columbus L., Lipfert J., Jambunathan K., Fox D.A., Sim A.Y.L., Doniach S., Lesley S.A., Mixing and matching detergents for membrane protein NMR structure determination, J. Am. Chem. Soc, 131, 7320 (2009)
5. Sivaramakrishnan S., Spink B.J., Sim A.Y.L., Doniach S., Spudich J.A., Dynamic charge interactions create surprising rigidity in the ER/K alpha-helical protein motif, PNAS, 105, 13356 (2008)
6. Sim A.Y.L., Goh G.K.L., Tripathy S., Andeen D., Lange F.F., Photoluminescence of hydrothermally epitaxied ZnO films, Electrochimica Acta, 52, 2933 (2007)

*: Authors contributed equally

Invited Talks

1. Probing the Structural Transitions of a Glycine-Dependent Riboswitch, APS Users Week 2008 (May 4-8), Workshop 2: SAXS and SANS applications in nano materials and nano biology